PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462954725
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family B3
Protein Properties Length: 152aa    MW: 16921.2 Da    PI: 9.5951
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462954725genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.92.4e-1562141186
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                f+k++t+s+v+   +l lp +f+++h  kk  +  +tl +e+ + +e  +    ++++  l++GW++F  +n+L +gD +vF+l++
  462954725  62 FVKAMTQSHVTGGFWLGLPIDFCRKHLPKK--DEHITLVNEDDELFETLY--LASKRG--LSAGWRGFSIQNNLVDGDCLVFELTE 141
                89************************5443..446***************..666666..9**********************864 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.12E-2156145IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.5E-1756145IPR015300DNA-binding pseudobarrel domain
CDDcd100172.17E-2160141No hitNo description
PROSITE profilePS5086310.53262152IPR003340B3 DNA binding domain
SMARTSM010194.4E-1362151IPR003340B3 DNA binding domain
PfamPF023624.3E-1362141IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MCSEGPAASP TFHRSPSTAR SSGRGRRTDL DNRVYATEAA RTYAINKAEK LEKGLKSRSP  60
RFVKAMTQSH VTGGFWLGLP IDFCRKHLPK KDEHITLVNE DDELFETLYL ASKRGLSAGW  120
RGFSIQNNLV DGDCLVFELT EPRIFKGLGG MS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001136712.12e-57uncharacterized protein LOC100216848
RefseqXP_008676667.12e-57PREDICTED: uncharacterized protein LOC100216848 isoform X1
SwissprotQ69V362e-54Y6944_ORYSJ; B3 domain-containing protein Os06g0194400
TrEMBLK7UR909e-59K7UR90_MAIZE; Uncharacterized protein
STRINGGRMZM2G106673_P025e-57(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP175638103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.15e-44B3 family protein